ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ip9A3 - ECOD Domain | ECOD

ECOD/Domains/e3ip9A3

e3ip9A3

UID: 001253136

PDB

Range: A:121-248
PDB: 3IP9 chain A(all domains)
UniProt: Q7CX36 (all domains)
Gene: Atu2422

Molecule: ABC transporter, substrate binding protein (Amino acid)

3D Structure

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Related Domains

Browse other domains in Peripla_BP_6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_6(2007.1.2.13)

Ligands

in contact, ≤ 4 Å

gamma-Aminobutyric acidABU
drugDrugBank DB02530

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF13458Peripla_BP_6

Periplasmic binding protein

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 3IP9 RCSB PDB: 3IP9 PDBe: 3IP9 UniProt: Q7CX36

Downloads

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Drug annotations from DrugDomain.