ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3i09B3 - ECOD Domain | ECOD

ECOD/Domains/e3i09B3

e3i09B3

UID: 001253180

PDB

Range: B:145-277
PDB: 3I09 chain B(all domains)
UniProt: Q62FT5 (all domains)

Molecule: Periplasmic branched-chain amino acid-binding protein

3D Structure

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Related Domains

Browse other domains in Peripla_BP_6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_6(2007.1.2.13)

Ligands

in contact, ≤ 4 Å

Acetoacetic acidAAE
drugDrugBank DB01762

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13458Peripla_BP_6

Periplasmic binding protein

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 3I09 RCSB PDB: 3I09 PDBe: 3I09 UniProt: Q62FT5

Downloads

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