ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bbyB3 - ECOD Domain | ECOD

ECOD/Domains/e4bbyB3

e4bbyB3

UID: 001253825

PDB

Range: B:386-435,B:457-658
PDB: 4BBY chain B(all domains)
UniProt: P97275 (all domains)
Gene: AGPS

Molecule: ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL

3D Structure

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Related Domains

Browse other domains in FAD-oxidase_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyFAD-oxidase_C(304.6.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF02913FAD-oxidase_C

FAD linked oxidases, C-terminal domain

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 4BBY RCSB PDB: 4BBY PDBe: 4BBY UniProt: P97275

Downloads

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Drug annotations from DrugDomain.