ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4f4qA3 - ECOD Domain | ECOD

ECOD/Domains/e4f4qA3

e4f4qA3

UID: 001253836

PDB

Range: A:202-274,A:304-468
PDB: 4F4Q chain A(all domains)
UniProt: A0R607 (all domains)
Gene: dprE1

Molecule: DprE1

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyALO(304.6.1.2)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
8-(hydroxyamino)-2-[(2S)-2-methyl-1,4-dioxa-8-azaspiro[4.5]dec-8-yl]-6-(trifluoromethyl)-4H-1,3-benzothiazin-4-one0SK

+ 1 additive (Glycerin)

Pfam Families

D-arabinono-1,4-lactone oxidase

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 4F4Q RCSB PDB: 4F4Q PDBe: 4F4Q UniProt: A0R607

Downloads

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GlycerinGOL

DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.