ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4c13A5 - ECOD Domain | ECOD

ECOD/Domains/e4c13A5

e4c13A5

UID: 001255284

PDB

Range: A:332-490
PDB: 4C13 chain A(all domains)
UniProt: Q2FZP6 (all domains)
Gene: murE

Molecule: UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--L-LYSINE LIGASE

3D Structure

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Related Domains

Browse other domains in Mur_ligase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurD-like peptide ligases, peptide-binding domain(7570)

HH-groupMurD-like peptide ligases, peptide-binding domain(7570.1)

TT-groupMurD-like peptide ligases, peptide-binding domain(7570.1.1)

FFamilyMur_ligase_C(7570.1.1.1)

Ligands

in contact, ≤ 4 Å

Uridine 5'Diphospho N-acetyl muramoyl-L-Alanyl-D-Glutamyl-L-LysineUML

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02875Mur_ligase_C

Mur ligase, glutamate ligase domain

ClanCL0794Mur_ligase_C_sf

External Links

ECOD PDB View: 4C13 RCSB PDB: 4C13 PDBe: 4C13 UniProt: Q2FZP6

Downloads

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