ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dmzB5 - ECOD Domain | ECOD

ECOD/Domains/e4dmzB5

e4dmzB5

UID: 001255997

PDB

Range: B:156-318
PDB: 4DMZ chain B(all domains)
UniProt: Q02PM6 (all domains)

Molecule: Putative uncharacterized protein pelD

3D Structure

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Related Domains

Browse other domains in GAF_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyGAF_2(223.1.1.23)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (Tromethamine, 1,2-ETHANEDIOL)

TromethamineTRS
DrugBank DB03754
1,2-ETHANEDIOLEDO

Pfam Families

GAF domain

ClanCL0161GAF

External Links

ECOD PDB View: 4DMZ RCSB PDB: 4DMZ PDBe: 4DMZ UniProt: Q02PM6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.