ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dmzB6 - ECOD Domain | ECOD

ECOD/Domains/e4dmzB6

e4dmzB6

UID: 001255998

PDB

Range: B:319-455
PDB: 4DMZ chain B(all domains)
UniProt: Q02PM6 (all domains)

Molecule: Putative uncharacterized protein pelD

3D Structure

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Related Domains

Browse other domains in PelD_GGDEF →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyPelD_GGDEF(304.48.1.27)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16963PelD_GGDEF

PelD GGDEF domain

External Links

ECOD PDB View: 4DMZ RCSB PDB: 4DMZ PDBe: 4DMZ UniProt: Q02PM6

Downloads

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