ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jjsA4 - ECOD Domain | ECOD

ECOD/Domains/e4jjsA4

e4jjsA4

UID: 001256368

PDB

Range: A:354-563
PDB: 4JJS chain A(all domains)
UniProt: O92972 (all domains)

Molecule: Genome polyprotein

3D Structure

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Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyRdRP_3(4967.1.1.5)

Ligands

in contact, ≤ 4 Å

2-{[(trans-4-methylcyclohexyl)carbonyl](propan-2-yl)amino}-5-[2-(trifluoromethyl)phenoxy]benzoic acid1M9

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4JJS RCSB PDB: 4JJS PDBe: 4JJS UniProt: O92972

Downloads

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