ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3n6mA4 - ECOD Domain | ECOD

ECOD/Domains/e3n6mA4

e3n6mA4

UID: 001256402

PDB

Range: A:1-369
PDB: 3N6M chain A(all domains)
UniProt: D3K0N8 (all domains)

Molecule: RNA-dependent RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_1(304.48.1.8)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
NICKEL (II) IONNI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 3N6M RCSB PDB: 3N6M PDBe: 3N6M UniProt: D3K0N8

Downloads

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