ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4k4yM4 - ECOD Domain | ECOD

ECOD/Domains/e4k4yM4

e4k4yM4

UID: 001256426

PDB

Range: M:1-369
PDB: 4K4Y chain M(all domains)
UniProt: Q5UEA2 (all domains)

Molecule: RNA-dependent RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_1(304.48.1.8)

Ligands

in contact, ≤ 4 Å

2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATEDCT

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4K4Y RCSB PDB: 4K4Y PDBe: 4K4Y UniProt: Q5UEA2

Downloads

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