ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3cfrA7 - ECOD Domain | ECOD

ECOD/Domains/e3cfrA7

e3cfrA7

UID: 001256531

PDB

Range: A:376-468,A:575-732
PDB: 3CFR chain A(all domains)
UniProt: Q38087 (all domains)
Gene: 43

Molecule: DNA polymerase

3D Structure

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Related Domains

Browse other domains in DNA_pol_B →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyDNA_pol_B(304.48.1.3)

Ligands

in contact, ≤ 4 Å

Thymidine 5'-triphosphateTTP
drugDrugBank DB02452
Calcium ionCA
metal
Chloride ion

Pfam Families

PF00136DNA_pol_B

DNA polymerase family B

ClanCL0194DNA_pol_B-like

External Links

ECOD PDB View: 3CFR RCSB PDB: 3CFR PDBe: 3CFR UniProt: Q38087

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.