ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3ht3A7 - ECOD Domain | ECOD

ECOD/Domains/e3ht3A7

e3ht3A7

UID: 001257079

PDB

Range: A:469-643
PDB: 3HT3 chain A(all domains)
UniProt: D9N168 (all domains)
Gene: DPO1

Molecule: DNA polymerase I, large fragment

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturealpha bundles(a.7)

XX-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970)

HH-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970.1)

TT-group"fingers" domain in bacteriophage RB69-like DNA polymerase I(4970.1.1)

FFamilyDNA_pol_A(4970.1.1.2)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine 5'-triphosphateDCP
drugDrugBank DB03258
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 3HT3 RCSB PDB: 3HT3 PDBe: 3HT3 UniProt: D9N168

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.