ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ht3D6 - ECOD Domain | ECOD

ECOD/Domains/e3ht3D6

e3ht3D6

UID: 001257082

PDB

Range: D:669-792
PDB: 3HT3 chain D(all domains)
UniProt: D9N168 (all domains)
Gene: DPO1

Molecule: DNA polymerase I, large fragment

3D Structure

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Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturealpha arrays(a.6)

XX-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964)

HH-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1)

TT-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1.1)

FFamilyDNA_pol_A(4964.1.1.1)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine 5'-triphosphateDCP
drugDrugBank DB03258

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 3HT3 RCSB PDB: 3HT3 PDBe: 3HT3 UniProt: D9N168

Downloads

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