ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rqwI5 - ECOD Domain | ECOD

ECOD/Domains/e3rqwI5

e3rqwI5

UID: 001259212

PDB

Range: I:11-199
PDB: 3RQW chain I(all domains)
UniProt: E0SJQ4 (all domains)
Gene: Dda3937_00520

Molecule: ELIC Pentameric Ligand Gated Ion Channel from Erwinia Chrysanthemi

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

AcetylcholineACH
drugDrugBank DB03128

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 3RQW RCSB PDB: 3RQW PDBe: 3RQW UniProt: E0SJQ4

Downloads

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Drug annotations from DrugDomain.