ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yn6E5 - ECOD Domain | ECOD

ECOD/Domains/e2yn6E5

e2yn6E5

UID: 001259372

PDB

Range: E:11-199
PDB: 2YN6 chain E(all domains)
UniProt: E0SJQ4 (all domains)
Gene: Dda3937_00520

Molecule: PENTAMERIC LIGAND-GATED ION CHANNEL ELIC

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

Barium ionBA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 2YN6 RCSB PDB: 2YN6 PDBe: 2YN6 UniProt: E0SJQ4

Downloads

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