ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3p0jA5 - ECOD Domain | ECOD

ECOD/Domains/e3p0jA5

e3p0jA5

UID: 001261016

PDB

Range: A:1-356
PDB: 3P0J chain A(all domains)
UniProt: Q4QFJ7 (all domains)
Gene: LMJF_14_1370

Molecule: Tyrosyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1b →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1b(2005.1.1.2)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
4-[(2S)-2-amino-3-hydroxypropyl]phenolTYE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00579tRNA-synt_1b

tRNA synthetases class I (W and Y)

ClanCL0039HUP

External Links

ECOD PDB View: 3P0J RCSB PDB: 3P0J PDBe: 3P0J UniProt: Q4QFJ7

Downloads

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