ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3axkA4 - ECOD Domain | ECOD

ECOD/Domains/e3axkA4

e3axkA4

UID: 001264274

PDB

Range: A:149-462
PDB: 3AXK chain A(all domains)
UniProt: P0C512 (all domains)
Gene: rbcL

Molecule: Ribulose bisphosphate carboxylase large chain

3D Structure

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Related Domains

Browse other domains in RuBisCO_large →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRuBisCO_large(2002.1.1.1)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

PF00016RuBisCO_large

Ribulose bisphosphate carboxylase large chain, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3AXK RCSB PDB: 3AXK PDBe: 3AXK UniProt: P0C512

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.