ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hjvC2 - ECOD Domain | ECOD

ECOD/Domains/e4hjvC2

e4hjvC2

UID: 001266897

PDB

Range: C:19-158,C:183-203
PDB: 4HJV chain C(all domains)
UniProt: P0C960 (all domains)
Gene: emtA

Molecule: Endo-type membrane-bound lytic murein transglycosylase A

3D Structure

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Related Domains

Browse other domains in SLT →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilySLT(235.1.1.9)

Ligands

in contact, ≤ 4 Å

(2R,3S,5S)-2-(Hydroxymethyl)-5-[(2-sulfoethyl)carbamoyl]-3-pyrrolidiniumyl 2-acetamido-2-deoxy-4-O-sulfo-beta-D-glucopyranosideBLG
drugDrugBank DB02595

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

Transglycosylase SLT domain

ClanCL0037Lysozyme

External Links

ECOD PDB View: 4HJV RCSB PDB: 4HJV PDBe: 4HJV UniProt: P0C960

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.