ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2v8dB3 - ECOD Domain | ECOD

ECOD/Domains/e2v8dB3

e2v8dB3

UID: 001268666

PDB

Range: B:25-247,B:364-453
PDB: 2V8D chain B(all domains)
UniProt: Q96W94 (all domains)
Gene: PYD3

Molecule: BETA-ALANINE SYNTHASE

3D Structure

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Related Domains

Browse other domains in Peptidase_M20, Peptidase_M28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M20, Peptidase_M28(2011.1.1.20)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01546Peptidase_M20

Peptidase family M20/M25/M40

ClanCL0865ZnExoPePases

PF04389Peptidase_M28

Peptidase family M28

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 2V8D RCSB PDB: 2V8D PDBe: 2V8D UniProt: Q96W94

Downloads

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