ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1wleB4 - ECOD Domain | ECOD

ECOD/Domains/e1wleB4

e1wleB4

UID: 001269728

PDB

Range: B:159-490
PDB: 1WLE chain B(all domains)
UniProt: Q9N0F3 (all domains)
Gene: SARS2

Molecule: Seryl-tRNA synthetase

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA-synt_2b →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2b(314.1.1.2)

Ligands

in contact, ≤ 4 Å

Seryl adenylateSRP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00587tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 1WLE RCSB PDB: 1WLE PDBe: 1WLE UniProt: Q9N0F3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure