ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2h89A4 - ECOD Domain | ECOD

ECOD/Domains/e2h89A4

e2h89A4

UID: 001270073

PDB

Range: A:9-246,A:376-461
PDB: 2H89 chain A(all domains)
UniProt: Q9YHT1 (all domains)
Gene: SDHA

Molecule: SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT

3D Structure

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Related Domains

Browse other domains in FAD_binding_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD_binding_2(2003.1.2.7)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Potassium ionK
metal
Unknown ligand

Pfam Families

PF00890FAD_binding_2

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2H89 RCSB PDB: 2H89 PDBe: 2H89 UniProt: Q9YHT1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.