ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ii4B4 - ECOD Domain | ECOD

ECOD/Domains/e3ii4B4

e3ii4B4

UID: 001270345

PDB

Range: B:1-144,B:263-340
PDB: 3II4 chain B(all domains)
UniProt: P9WHH8 (all domains)
Gene: lpdC

Molecule: Dihydrolipoyl dehydrogenase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2+FAD_oxidored →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2+FAD_oxidored(2003.1.2.53)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
N-[2-(2,4-dichlorophenyl)ethyl]-2-{8-[(2,4-dimethoxyphenyl)carbonyl]-4-oxo-1-phenyl-1,3,8-triazaspiro[4.5]dec-3-yl}acetamide3II

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

PF12831FAD_oxidored

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3II4 RCSB PDB: 3II4 PDBe: 3II4 UniProt: P9WHH8

Downloads

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