ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zq5A5 - ECOD Domain | ECOD

ECOD/Domains/e3zq5A5

e3zq5A5

UID: 001271873

PDB

Range: A:127-324
PDB: 3ZQ5 chain A(all domains)
UniProt: Q55168 (all domains)
Gene: cph1

Molecule: PHYTOCHROME-LIKE PROTEIN CPH1

3D Structure

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Related Domains

Browse other domains in GAF →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyGAF(223.1.1.3)

Ligands

in contact, ≤ 4 Å

PhycocyanobilinCYC
Sodium ionNA
metal

+ 3 additives (Glycerin, Phosphate ion, Acetate ion)

GlycerinGOL

Pfam Families

GAF domain

ClanCL0161GAF

External Links

ECOD PDB View: 3ZQ5 RCSB PDB: 3ZQ5 PDBe: 3ZQ5 UniProt: Q55168

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Phosphate ionPO4

DrugBank DB14523

Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.