ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3d8sA3 - ECOD Domain | ECOD

ECOD/Domains/e3d8sA3

e3d8sA3

UID: 001273021

PDB

Range: A:36-156
PDB: 3D8S chain A(all domains)
UniProt: Q72KM1 (all domains)
Gene: TT_C0312

Molecule: Uroporphyrinogen-III synthase

3D Structure

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Related Domains

Browse other domains in HEM4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupUroporphyrinogen III synthase (U3S, HemD)(2007.1.8)

FFamilyHEM4(2007.1.8.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Uroporphyrinogen-III synthase HemD

External Links

ECOD PDB View: 3D8S RCSB PDB: 3D8S PDBe: 3D8S UniProt: Q72KM1

Downloads

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