ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ekmE3 - ECOD Domain | ECOD

ECOD/Domains/e3ekmE3

e3ekmE3

UID: 001273588

PDB

Range: E:25-156
PDB: 3EKM chain E(all domains)
UniProt: Q9LFG2 (all domains)
Gene: DAPF

Molecule: Diaminopimelate epimerase, chloroplastic

3D Structure

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Related Domains

Browse other domains in DAP_epimerase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupDiaminopimelate epimerase-like(286)

HH-groupDiaminopimelate epimerase-like(286.1)

TT-groupDiaminopimelate epimerase-like(286.1.1)

FFamilyDAP_epimerase(286.1.1.1)

Ligands

in contact, ≤ 4 Å

(2R,6S)-2,6-DIAMINO-2-METHYLHEPTANEDIOIC ACIDZDR

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01678DAP_epimerase

Diaminopimelate epimerase

ClanCL0288DAP_epimerase

External Links

ECOD PDB View: 3EKM RCSB PDB: 3EKM PDBe: 3EKM UniProt: Q9LFG2

Downloads

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