ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dtvB4 - ECOD Domain | ECOD

ECOD/Domains/e3dtvB4

e3dtvB4

UID: 001276125

PDB

Range: B:114-238
PDB: 3DTV chain B(all domains)
UniProt: Q05115 (all domains)

Molecule: Arylmalonate decarboxylase

3D Structure

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Related Domains

Browse other domains in Amdase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupATC-like(2007.1.5)

FFamilyAmdase(2007.1.5.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Glycerin)

Sulfate ionSO4
DrugBank DB14546
GlycerinGOL
DrugBank DB09462within 5 Å only

Shown in the structure viewer.

Pfam Families

Arylmalonate decarboxylase

ClanCL0399Asp-glut_race

External Links

ECOD PDB View: 3DTV RCSB PDB: 3DTV PDBe: 3DTV UniProt: Q05115

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.