ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2erqA2 - ECOD Domain | ECOD

ECOD/Domains/e2erqA2

e2erqA2

UID: 001276730

PDB

Range: A:185-400
PDB: 2ERQ chain A(all domains)
UniProt: Q9DGB9 (all domains)

Molecule: vascular apoptosis-inducing protein 1

3D Structure

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Related Domains

Browse other domains in Reprolysin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyReprolysin(2498.1.1.4)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01421Reprolysin

Reprolysin (M12B) family zinc metalloprotease

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 2ERQ RCSB PDB: 2ERQ PDBe: 2ERQ UniProt: Q9DGB9

Downloads

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