ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ercD6 - ECOD Domain | ECOD

ECOD/Domains/e3ercD6

e3ercD6

UID: 001278015

PDB

Range: D:304-479
PDB: 3ERC chain D(all domains)
UniProt: P23371 (all domains)
Gene: OPG063

Molecule: Poly(A) polymerase catalytic subunit

3D Structure

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Related Domains

Browse other domains in Pox_polyA_pol_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-terminal a+b domain in Poly(A) polymerase catalytic subunit(4945)

HH-groupC-terminal a+b domain in Poly(A) polymerase catalytic subunit(4945.1)

TT-groupC-terminal a+b domain in Poly(A) polymerase catalytic subunit(4945.1.1)

FFamilyPox_polyA_pol_C(4945.1.1.1)

Ligands

in contact, ≤ 4 Å

Cordycepin Triphosphate3AT
drugDrugBank DB01860
Uridine monophosphateU5P
drugDrugBank DB03685within 5 Å only

Pfam Families

PF12629Pox_polyA_pol_C

Poxvirus poly(A) polymerase C-terminal domain

External Links

ECOD PDB View: 3ERC RCSB PDB: 3ERC PDBe: 3ERC UniProt: P23371

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.