ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3jz0B3 - ECOD Domain | ECOD

ECOD/Domains/e3jz0B3

e3jz0B3

UID: 001278031

PDB

Range: B:131-267
PDB: 3JZ0 chain B(all domains)
UniProt: Q9WVY4 (all domains)
Gene: linB

Molecule: Lincosamide nucleotidyltransferase

3D Structure

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Related Domains

Browse other domains in LinB-like_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyLinB-like_C(102.1.3.10)

Ligands

in contact, ≤ 4 Å

alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596
ClindamycinCLY
drugDrugBank DB01190within 5 Å only

Pfam Families

PF21418LinB-like_C

Lincosamide nucleotidyltransferase-like, C-terminal domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 3JZ0 RCSB PDB: 3JZ0 PDBe: 3JZ0 UniProt: Q9WVY4

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.