ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3bwcB2 - ECOD Domain | ECOD

ECOD/Domains/e3bwcB2

e3bwcB2

UID: 001279112

PDB

Range: B:77-302
PDB: 3BWC chain B(all domains)
UniProt: Q4DA73 (all domains)
Gene: Tc00.1047053510339.50

Molecule: Spermidine synthase

3D Structure

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Related Domains

Browse other domains in Spermine_synth →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilySpermine_synth(2003.1.5.13)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer.

Pfam Families

PF01564Spermine_synth

Spermine/spermidine synthase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3BWC RCSB PDB: 3BWC PDBe: 3BWC UniProt: Q4DA73

Downloads

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Drug annotations from DrugDomain.