ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2e5wA2 - ECOD Domain | ECOD

ECOD/Domains/e2e5wA2

e2e5wA2

UID: 001279136

PDB

Range: A:1-57
PDB: 2E5W chain A(all domains)
UniProt: O57950 (all domains)
Gene: speE

Molecule: Probable spermidine synthase

3D Structure

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Related Domains

Browse other domains in Spermine_synt_N →

Classification

AArchitecturebeta meanders(a.2)

XX-groupSpermidine synthase tetramerisation domain(3699)

HH-groupSpermidine synthase tetramerisation domain(3699.1)

TT-groupSpermidine synthase tetramerisation domain(3699.1.1)

FFamilySpermine_synt_N(3699.1.1.1)

Ligands

in contact, ≤ 4 Å

5'-S-methyl-5'-thioadenosineMTA
drugDrugBank DB02282
1-{4-[(3-aminopropyl)amino]butyl}guanidineAG3

+ 1 additive (Acetate)

Acetate

Pfam Families

PF17284Spermine_synt_N

Spermidine synthase tetramerisation domain

External Links

ECOD PDB View: 2E5W RCSB PDB: 2E5W PDBe: 2E5W UniProt: O57950

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.