ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3tpzB4 - ECOD Domain | ECOD

ECOD/Domains/e3tpzB4

e3tpzB4

UID: 001279226

PDB

Range: B:202-267
PDB: 3TPZ chain B(all domains)
UniProt: P06992 (all domains)
Gene: rsmA

Molecule: Ribosomal RNA small subunit methyltransferase A

3D Structure

Loading viewer...

Related Domains

Browse other domains in RrnaAD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupH2TH(102.2)

TT-groupH2TH(102.2.1)

FFamilyRrnaAD(102.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ribosomal RNA adenine dimethylase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3TPZ RCSB PDB: 3TPZ PDBe: 3TPZ UniProt: P06992

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure