ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ps9A5 - ECOD Domain | ECOD

ECOD/Domains/e3ps9A5

e3ps9A5

UID: 001279475

PDB

Range: A:1-264
PDB: 3PS9 chain A(all domains)
UniProt: C6ELC9 (all domains)

Molecule: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC

3D Structure

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Related Domains

Browse other domains in Methyltransf_30 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_30(2003.1.5.49)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05430Methyltransf_30

S-adenosyl-L-methionine-dependent methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3PS9 RCSB PDB: 3PS9 PDBe: 3PS9 UniProt: C6ELC9

Downloads

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