ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2rdsA2 - ECOD Domain | ECOD

ECOD/Domains/e2rdsA2

e2rdsA2

UID: 001279808

PDB

Range: A:5-265
PDB: 2RDS chain A(all domains)
UniProt: Q82IZ1 (all domains)
Gene: ptlH

Molecule: 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase

3D Structure

Loading viewer...

Related Domains

Browse other domains in PhyH →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyPhyH(10.12.1.25)

Ligands

in contact, ≤ 4 Å

(1S,3aS,5aR,8aS)-1,7,7-trimethyl-1,2,3,3a,5a,6,7,8-octahydrocyclopenta[c]pentalene-4-carboxylic acid1PL
drugDrugBank DB06903
FE (III) IONFE
metal

Pfam Families

Phytanoyl-CoA dioxygenase (PhyH)

ClanCL0029Cupin

External Links

ECOD PDB View: 2RDS RCSB PDB: 2RDS PDBe: 2RDS UniProt: Q82IZ1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

N-oxalylglycine

Magnesium ionMG

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.