ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zdsF3 - ECOD Domain | ECOD

ECOD/Domains/e3zdsF3

e3zdsF3

UID: 001280080

PDB

Range: F:276-433
PDB: 3ZDS chain F(all domains)
UniProt: Q88E47 (all domains)
Gene: hmgA

Molecule: HOMOGENTISATE 1,2-DIOXYGENASE

3D Structure

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Related Domains

Browse other domains in HgmA_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyHgmA_C(10.12.1.20)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
2-[(6R)-6-(dioxidanyl)-6-oxidanyl-3-oxidanylidene-cyclohexa-1,4-dien-1-yl]ethanoic acidHMQ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Homogentisate 1,2-dioxygenase C-terminal

ClanCL0029Cupin

External Links

ECOD PDB View: 3ZDS RCSB PDB: 3ZDS PDBe: 3ZDS UniProt: Q88E47

Downloads

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