ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4aneF2 - ECOD Domain | ECOD

ECOD/Domains/e4aneF2

e4aneF2

UID: 001280669

PDB

Range: F:2-136
PDB: 4ANE chain F(all domains)
UniProt: P9WJH7 (all domains)
Gene: ndkA

Molecule: NUCLEOSIDE DIPHOSPHATE KINASE

3D Structure

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Related Domains

Browse other domains in NDK →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNucleoside diphosphate kinases(304.34)

TT-groupNucleoside diphosphate kinases(304.34.1)

FFamilyNDK(304.34.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nucleoside diphosphate kinase

External Links

ECOD PDB View: 4ANE RCSB PDB: 4ANE PDBe: 4ANE UniProt: P9WJH7

Downloads

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