ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4eqqB1 - ECOD Domain | ECOD

ECOD/Domains/e4eqqB1

e4eqqB1

UID: 001281051

PDB

Range: B:45-95
PDB: 4EQQ chain B(all domains)
UniProt: O48388 (all domains)
Gene: ltp

Molecule: Putative host cell surface-exposed lipoprotein

3D Structure

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Related Domains

Browse other domains in Lipoprotein_Ltp →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupDNA repair regulatory protein RecX(101.35)

TT-groupDNA repair regulatory protein RecX(101.35.1)

FFamilyLipoprotein_Ltp(101.35.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, Sulfate ion)

Phosphate ionPO4
DrugBank DB14523
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07553Lipoprotein_Ltp

Host cell surface-exposed lipoprotein

External Links

ECOD PDB View: 4EQQ RCSB PDB: 4EQQ PDBe: 4EQQ UniProt: O48388

Downloads

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