ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2hzmD1 - ECOD Domain | ECOD

ECOD/Domains/e2hzmD1

e2hzmD1

UID: 001281163

PDB

Range: D:2-93,D:160-312
PDB: 2HZM chain D(all domains)
UniProt: P32585 (all domains)
Gene: SRB5

Molecule: RNA polymerase II mediator complex subunit 18

3D Structure

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Related Domains

Browse other domains in Med18 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupmRNA triphosphatase CET1-related(868)

HH-groupmRNA triphosphatase CET1-related(868.1)

TT-groupmRNA triphosphatase CET1-related(868.1.1)

FFamilyMed18(868.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Med18 protein

ClanCL0273CYTH

External Links

ECOD PDB View: 2HZM RCSB PDB: 2HZM PDBe: 2HZM UniProt: P32585

Downloads

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