ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4j0qC3 - ECOD Domain | ECOD

ECOD/Domains/e4j0qC3

e4j0qC3

UID: 001281270

PDB

Range: C:206-304
PDB: 4J0Q chain C(all domains)
UniProt: Q88QP8 (all domains)
Gene: tufA

Molecule: Elongation factor Tu-A

3D Structure

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Related Domains

Browse other domains in GTP_EFTU_D2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyGTP_EFTU_D2(1.1.7.19)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03144GTP_EFTU_D2

Elongation factor Tu domain 2

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 4J0Q RCSB PDB: 4J0Q PDBe: 4J0Q UniProt: Q88QP8

Downloads

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