ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kkjA2 - ECOD Domain | ECOD

ECOD/Domains/e4kkjA2

e4kkjA2

UID: 001281435

PDB

Range: A:308-410
PDB: 4KKJ chain A(all domains)
UniProt: P20061 (all domains)
Gene: TCN1

Molecule: Transcobalamin-1

3D Structure

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Related Domains

Browse other domains in DUF4430 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyDUF4430(221.1.1.50)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
COB(II)INAMIDECBY
Cyanide ionCYN

Pfam Families

PF14478DUF4430

Domain of unknown function (DUF4430)

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 4KKJ RCSB PDB: 4KKJ PDBe: 4KKJ UniProt: P20061

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.