ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cq1C1 - ECOD Domain | ECOD

ECOD/Domains/e4cq1C1

e4cq1C1

UID: 001282668

PDB

Range: C:337-444
PDB: 4CQ1 chain C(all domains)
UniProt: Q9UKA9 (all domains)
Gene: PTBP2

Molecule: POLYPYRIMIDINE TRACT-BINDING PROTEIN 2

3D Structure

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Related Domains

Browse other domains in RRM_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_5(304.9.1.23)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

ClanCL0221RRM

External Links

ECOD PDB View: 4CQ1 RCSB PDB: 4CQ1 PDBe: 4CQ1 UniProt: Q9UKA9

Downloads

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