ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4l5zA2 - ECOD Domain | ECOD

ECOD/Domains/e4l5zA2

e4l5zA2

UID: 001283077

PDB

Range: A:406-767
PDB: 4L5Z chain A(all domains)
UniProt: P82610 (all domains)
Gene: MET6

Molecule: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase

3D Structure

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Related Domains

Browse other domains in Meth_synt_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMeth_synt_2(2002.1.1.74)

Ligands

in contact, ≤ 4 Å

HomocysteineHCS
drugDrugBank DB04422
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01717Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4L5Z RCSB PDB: 4L5Z PDBe: 4L5Z UniProt: P82610

Downloads

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