ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mp3A2 - ECOD Domain | ECOD

ECOD/Domains/e4mp3A2

e4mp3A2

UID: 001283151

PDB

Range: A:2-122,A:309-336
PDB: 4MP3 chain A(all domains)
UniProt: A6QDA1 (all domains)

Molecule: Putative ornithine cyclodeaminase

3D Structure

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Related Domains

Browse other domains in OCD_Mu_crystall →

Classification

AArchitecturea+b two layers(a.11)

XX-groupOrnithine cyclodeaminase-like enzymes dimerization domain(3692)

HH-groupOrnithine cyclodeaminase-like enzymes dimerization domain(3692.1)

TT-groupOrnithine cyclodeaminase-like enzymes dimerization domain(3692.1.1)

FFamilyOCD_Mu_crystall(3692.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02423OCD_Mu_crystall

Ornithine cyclodeaminase/mu-crystallin family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4MP3 RCSB PDB: 4MP3 PDBe: 4MP3 UniProt: A6QDA1

Downloads

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