ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4becB1 - ECOD Domain | ECOD

ECOD/Domains/e4becB1

e4becB1

UID: 001283786

PDB

Range: B:456-711
PDB: 4BEC chain B(all domains)
UniProt: P10486 (all domains)
Gene: hsdR

Molecule: TYPE I RESTRICTION ENZYME HSDR

3D Structure

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Related Domains

Browse other domains in UvrB_D3-like →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyUvrB_D3-like(2004.1.1.234)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22679T1R_D3-like

Type I restriction enzyme subunit R domain 3

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4BEC RCSB PDB: 4BEC PDBe: 4BEC UniProt: P10486

Downloads

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