ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jexA1 - ECOD Domain | ECOD

ECOD/Domains/e4jexA1

e4jexA1

UID: 001284062

PDB

Range: A:307-405
PDB: 4JEX chain A(all domains)
UniProt: P40732 (all domains)
Gene: argD

Molecule: Acetylornithine/succinyldiaminopimelate aminotransferase

3D Structure

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Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyAminotran_3(3016.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate ion, 1,2-ETHANEDIOL)

Acetate ionACT
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4JEX RCSB PDB: 4JEX PDBe: 4JEX UniProt: P40732

Downloads

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