ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4njtC1 - ECOD Domain | ECOD

ECOD/Domains/e4njtC1

e4njtC1

UID: 001284685

PDB

Range: C:1-99
PDB: 4NJT chain C(all domains)
UniProt: Q9J006 (all domains)
Gene: pol

Molecule: Protease

3D Structure

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Related Domains

Browse other domains in RVP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyRVP(1.1.1.3)

Ligands

in contact, ≤ 4 Å

Darunavir017
drugDrugBank DB01264

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Retroviral aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 4NJT RCSB PDB: 4NJT PDBe: 4NJT UniProt: Q9J006

Downloads

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