ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nn0A1 - ECOD Domain | ECOD

ECOD/Domains/e4nn0A1

e4nn0A1

UID: 001284704

PDB

Range: A:103-238
PDB: 4NN0 chain A(all domains)
UniProt: Q9BXJ0 (all domains)
Gene: C1QTNF5

Molecule: Complement C1q tumor necrosis factor-related protein 5

3D Structure

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Related Domains

Browse other domains in C1q →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupTNF-like(10.3)

TT-groupTNF-like(10.3.1)

FFamilyC1q(10.3.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Sulfate ion, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

C1q domain

ClanCL0100C1q_TNF

External Links

ECOD PDB View: 4NN0 RCSB PDB: 4NN0 PDBe: 4NN0 UniProt: Q9BXJ0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.