ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ognA1 - ECOD Domain | ECOD

ECOD/Domains/e4ognA1

e4ognA1

UID: 001285002

PDB

Range: A:11-110
PDB: 4OGN chain A(all domains)
UniProt: Q00987 (all domains)
Gene: MDM2

Molecule: E3 ubiquitin-protein ligase Mdm2

3D Structure

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Related Domains

Browse other domains in SWIB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSWIB/MDM2 domain(178)

HH-groupSWIB/MDM2 domain(178.1)

TT-groupSWIB/MDM2 domain(178.1.1)

FFamilySWIB(178.1.1.1)

Ligands

in contact, ≤ 4 Å

6-{[(3R,5R,6S)-1-[(1S)-2-(tert-butylsulfonyl)-1-cyclopropylethyl]-5-(3-chlorophenyl)-6-(4-chlorophenyl)-3-methyl-2-oxopiperidin-3-yl]methyl}pyridine-3-carboxylic acid2U5

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

SWIB/MDM2 domain

ClanCL0906SWIB

External Links

ECOD PDB View: 4OGN RCSB PDB: 4OGN PDBe: 4OGN UniProt: Q00987

Downloads

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Drug annotations from DrugDomain.