ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3w8rB1 - ECOD Domain | ECOD

ECOD/Domains/e3w8rB1

e3w8rB1

UID: 001285323

PDB

Range: B:4-209
PDB: 3W8R chain B(all domains)
UniProt: Q5SKR5 (all domains)
Gene: udk

Molecule: Uridine kinase

3D Structure

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Related Domains

Browse other domains in PRK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyPRK(2004.1.1.44)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-[Beta, Gamma-Methylene]TriphosphateACP
drugDrugBank DB03909
CytidineCTN
drugDrugBank DB02097

Shown in the structure viewer.

Pfam Families

Phosphoribulokinase / Uridine kinase family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3W8R RCSB PDB: 3W8R PDBe: 3W8R UniProt: Q5SKR5

Downloads

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Drug annotations from DrugDomain.