ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2a5hA1 - ECOD Domain | ECOD

ECOD/Domains/e2a5hA1

e2a5hA1

UID: 001285950

PDB

Range: A:3-411
PDB: 2A5H chain A(all domains)
UniProt: Q9XBQ8 (all domains)
Gene: kamA

Molecule: L-lysine 2,3-aminomutase

3D Structure

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Related Domains

Browse other domains in Radical_SAM,LAM_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM,LAM_C(2002.1.1.124)

Ligands

in contact, ≤ 4 Å

LysineLYS
drugDrugBank DB00123
AdemetionineSAM
drugDrugBank DB00118
Pyridoxal phosphate

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

Lysine-2,3-aminomutase

External Links

ECOD PDB View: 2A5H RCSB PDB: 2A5H PDBe: 2A5H UniProt: Q9XBQ8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB00114within 5 Å only

Iron/sulfur clusterSF4

Zinc ionZN

metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.